Early cellular changes are indicators of pre-bleaching thermal stress in the coral host, Journal of Experimental Marine Biology and Ecology, vol.364, issue.2, pp.63-71, 2008. ,
DOI : 10.1016/j.jembe.2008.06.032
Harboring oil-degrading bacteria: A potential mechanism of adaptation and survival in corals inhabiting oil-contaminated reefs, Marine Pollution Bulletin, vol.72, issue.2, pp.364-374, 2013. ,
DOI : 10.1016/j.marpolbul.2012.08.029
Coral reefs: Corals' adaptive response to climate change, Nature, vol.43, issue.7001, p.741, 2004. ,
DOI : 10.1016/0304-3800(94)00132-4
Nitrate competition in a coral symbiosis varies with temperature among Symbiodinium clades, The ISME Journal, vol.7, issue.6, pp.1248-1251, 2013. ,
DOI : 10.1111/j.1365-3040.2008.01802.x
The synthesis of mycosporine-like amino acids (MAAs) by cultured, symbiotic dinoflagellates, Journal of Experimental Marine Biology and Ecology, vol.249, issue.2, pp.219-233, 2000. ,
DOI : 10.1016/S0022-0981(00)00192-1
Superoxide Dismutase Is a Virulence Factor Produced by the Coral Bleaching Pathogen Vibrio shiloi, Current Microbiology, vol.46, issue.6, pp.418-422, 2003. ,
DOI : 10.1007/s00284-002-3912-5
Inhibition of photosynthesis and bleaching of zooxanthellae by the coral pathogen Vibrio shiloi, Environmental Microbiology, vol.63, issue.3, pp.223-229, 1999. ,
DOI : 10.1146/annurev.pp.31.060180.002553
Vibrio coralliilyticus sp. nov., a temperature-dependent pathogen of the coral Pocillopora damicornis, INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, vol.53, issue.1, pp.309-315, 2003. ,
DOI : 10.1099/ijs.0.02402-0
Temperature-Regulated Bleaching and Lysis of the Coral Pocillopora damicornis by the Novel Pathogen Vibrio coralliilyticus, Applied and Environmental Microbiology, vol.69, issue.7, pp.4236-4242, 2003. ,
DOI : 10.1128/AEM.69.7.4236-4242.2003
The role of zooxanthellae in the thermal tolerance of corals: a 'nugget of hope' for coral reefs in an era of climate change, Proceedings of the Royal Society B: Biological Sciences, vol.24, issue.1478, pp.2305-2312, 2006. ,
DOI : 10.1098/rspb.2001.1733
Microbial disease and the coral holobiont, Trends in Microbiology, vol.17, issue.12, pp.554-562, 2009. ,
DOI : 10.1016/j.tim.2009.09.004
Towards a better understanding of white syndromes and their causes on Indo-Pacific coral reefs, Coral Reefs, vol.362, issue.2, pp.233-242, 2015. ,
DOI : 10.1007/s00338-014-1239-x
Perspectives on mucus secretion in reef corals, Marine Ecology Progress Series, vol.296, pp.291-309, 2005. ,
DOI : 10.3354/meps296291
Thermal Stress and Coral Cover as Drivers of Coral Disease Outbreaks, PLoS Biology, vol.3, issue.6, p.124, 2007. ,
DOI : 10.1371/journal.pbio.0050124.t003
Coral Bleaching as an Adaptive Mechanism, BioScience, vol.43, issue.5, pp.320-326, 1993. ,
DOI : 10.2307/1312064
) with nitrogen acquired from bacterial associates, Ecology and Evolution, vol.31, issue.8, pp.2393-2400, 2013. ,
DOI : 10.1002/ece3.642
Symbiont diversity in scleractinian corals from tropical reefs and subtropical non-reef communities in Taiwan, Coral Reefs, vol.133, issue.1, pp.11-22, 2005. ,
DOI : 10.1007/s00338-004-0389-7
Environmental Symbiont Acquisition May Not Be the Solution to Warming Seas for Reef-Building Corals, PLoS ONE, vol.18, issue.10, p.7, 2010. ,
DOI : 10.1371/journal.pone.0013258.g005
Environmental Factors Controlling the Distribution of Symbiodinium Harboured by the Coral Acropora millepora on the Great Barrier Reef, Environmental factors controlling the distribution of Symbiodinium harboured by the coral Acropora millepora on the Great Barrier Reef, p.25536, 2011. ,
DOI : 10.1371/journal.pone.0025536.s002
Symbiodinium associations with diseased and healthy scleractinian corals, Coral Reefs, vol.51, issue.2, pp.437-448, 2009. ,
DOI : 10.1007/s00338-008-0464-6
Investigating the causes and consequences of symbiont shuffling in a multi-partner reef coral symbiosis under environmental change, Proceedings of the Royal Society B: Biological Sciences, vol.282, issue.1809, 2015. ,
DOI : 10.1038/nclimate1829
Vibriosis induced by experimental cohabitation in Crassostrea gigas: Evidence of??early infection and down-expression of immune-related genes, Fish & Shellfish Immunology, vol.30, issue.2, pp.691-699, 2011. ,
DOI : 10.1016/j.fsi.2010.12.017
Identity and diversity of coral endosymbionts (zooxanthellae) from three Palauan reefs with contrasting bleaching, temperature and shading histories, Molecular Ecology, vol.17, issue.Suppl., pp.2445-2458, 2004. ,
DOI : 10.1111/j.1365-294X.2004.02230.x
Coral Disease, Environmental Drivers, and the Balance Between Coral and Microbial Associates, Oceanography, vol.20, issue.1, pp.172-195, 2007. ,
DOI : 10.5670/oceanog.2007.91
Photobiology of Symbiodinium revisited: bio-physical and bio-optical signatures, Coral Reefs, vol.51, issue.1, pp.179-195, 2009. ,
DOI : 10.1007/s00338-008-0444-x
Coral Reefs Under Rapid Climate Change and Ocean Acidification, Science, vol.318, issue.5857, pp.1737-1742, 2007. ,
DOI : 10.1126/science.1152509
populations within a common reef-building coral on the Great Barrier Reef, Molecular Ecology, vol.298, issue.14, pp.3693-3708, 2013. ,
DOI : 10.1111/mec.12342
Temperature-induced bleaching of corals begins with impairment of the CO2 fixation mechanism in zooxanthellae, Plant, Cell and Environment, vol.1928, issue.12, pp.1219-1230, 1998. ,
DOI : 10.1111/j.0022-3646.1995.00138.x
A community change in the algal endosymbionts of a scleractinian coral following a natural bleaching event: field evidence of acclimatization, Proceedings of the Royal Society B: Biological Sciences, vol.204, issue.8, pp.1359-1365, 2008. ,
DOI : 10.1046/j.1365-294X.2003.01988.x
The Adaptive Bleaching Hypothesis: Experimental Tests of Critical Assumptions, The Biological Bulletin, vol.200, issue.1, pp.51-58, 2001. ,
DOI : 10.2307/1543084
Vibrio shiloi sp. nov., the causative agent of bleaching of the coral Oculina patagonica., International Journal of Systematic and Evolutionary Microbiology, vol.51, issue.4, pp.1383-1388, 2001. ,
DOI : 10.1099/00207713-51-4-1383
"Species" Radiations of Symbiotic Dinoflagellates in the Atlantic and Indo-Pacific Since the Miocene-Pliocene Transition, Molecular Biology and Evolution, vol.22, issue.3, pp.570-581, 2005. ,
DOI : 10.1093/molbev/msi042
Outbreak and persistence of opportunistic symbiotic dinoflagellates during the 2005 Caribbean mass coral 'bleaching' event, Proceedings of the Royal Society B: Biological Sciences, vol.7, issue.12, pp.4139-4148, 2009. ,
DOI : 10.1046/j.1365-294X.2003.01988.x
Host-symbiont recombination versus natural selection in the response of coral-dinoflagellate symbioses to environmental disturbance, Proceedings of the Royal Society B: Biological Sciences, vol.51, issue.3, pp.2925-2934, 2010. ,
DOI : 10.1371/journal.pone.0006262
Oxidative stress causes coral bleaching during exposure to elevated temperatures, Coral Reefs, vol.16, issue.3, pp.187-192, 1997. ,
DOI : 10.1007/s003380050073
The endosymbiotic dinoflagellates (Symbiodinium sp.) of corals are parasites and mutualists, Coral Reefs, vol.32, issue.254, pp.603-611, 2013. ,
DOI : 10.1007/s00338-013-1051-z
The Acquisition of Exogenous Algal Symbionts by an Octocoral After Bleaching, Science, vol.304, issue.5676, pp.1490-1492, 2004. ,
DOI : 10.1126/science.1097323
Flexibility in Algal Endosymbioses Shapes Growth in Reef Corals, Science, vol.304, issue.5676, pp.1492-1494, 2004. ,
DOI : 10.1126/science.1095733
Coral bleaching: the winners and the losers, Ecology Letters, vol.1, issue.2, pp.122-131, 2001. ,
DOI : 10.1046/j.1461-0248.2001.00203.x
The Roles and Interactions of Symbiont, Host and Environment in Defining Coral Fitness, PLoS ONE, vol.36, issue.31, p.6364, 2009. ,
DOI : 10.1371/journal.pone.0006364.s008
) in coral tissue using real-time PCR, Molecular Ecology Resources, vol.204, issue.1, pp.74-82, 2009. ,
DOI : 10.1111/j.1755-0998.2008.02222.x
Induction of terpene biosynthesis in dinoflagellate symbionts of Caribbean gorgonians, Phytochemistry, vol.67, issue.19, pp.2133-2139, 2006. ,
DOI : 10.1016/j.phytochem.2006.06.007
Bacterial community structure associated with white band disease in the elkhorn coral Acropora palmata determined using culture-independent 16S rRNA techniques, Diseases of Aquatic Organisms, vol.69, pp.79-88, 2006. ,
DOI : 10.3354/dao069079
The bacterial ecology of a plague-like disease affecting the Caribbean coral Montastrea annularis, Environmental Microbiology, vol.94, issue.5, pp.370-382, 2003. ,
DOI : 10.1128/AEM.67.9.4374-4376.2001
A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai???i, Molecular Phylogenetics and Evolution, vol.56, issue.1, pp.492-497, 2010. ,
DOI : 10.1016/j.ympev.2010.03.040
dinoflagellates: a perspective on rarity, symbiosis, and evolution, PeerJ, vol.41, p.394, 2014. ,
DOI : 10.7717/peerj.394/supp-2
Detection and Quantification of the Coral Pathogen Vibrio coralliilyticus by Real-Time PCR with TaqMan Fluorescent Probes, Applied and Environmental Microbiology, vol.76, issue.15, pp.5282-5286, 2010. ,
DOI : 10.1128/AEM.00330-10
Endosymbiotic flexibility associates with environmental sensitivity in scleractinian corals, Proceedings of the Royal Society B: Biological Sciences, vol.6, issue.5, pp.4352-4361, 2012. ,
DOI : 10.1371/journal.pone.0020434
PSII photoinhibition and photorepair in Symbiodinium (Pyrrhophyta) differs between thermally tolerant and sensitive phylotypes, Marine Ecology Progress Series, vol.406, pp.57-70, 2010. ,
DOI : 10.3354/meps08571
Enhanced photoprotection pathways in symbiotic dinoflagellates of shallow-water corals and other cnidarians, Proc. Natl Acad. Sci. USA, pp.13674-13678, 2008. ,
DOI : 10.1073/pnas.0805187105
Collapse of a New Living Species of Giant Clam in the Red Sea, Current Biology, vol.18, issue.17, pp.1349-1354, 2008. ,
DOI : 10.1016/j.cub.2008.07.060
DIFFERENTIAL IMPACTS OF PHOTOACCLIMATION AND THERMAL STRESS ON THE PHOTOBIOLOGY OF FOUR DIFFERENT PHYLOTYPES OF SYMBIODINIUM (PYRRHOPHYTA)1, Journal of Phycology, vol.43, issue.3, 2006. ,
DOI : 10.1073/pnas.96.14.8007
Early molecular responses of coral larvae to hyperthermal stress, Molecular Ecology, vol.11, issue.24, pp.5101-5114, 2009. ,
DOI : 10.1111/j.1365-294X.2009.04419.x
Diversity and distribution of coral-associated bacteria, Marine Ecology Progress Series, vol.243, pp.1-10, 2002. ,
DOI : 10.3354/meps243001
The role of microorganisms in coral health, disease and evolution, Nature Reviews Microbiology, vol.70, issue.5, pp.355-362, 2007. ,
DOI : 10.1038/nrmicro1635
The role of microorganisms in coral bleaching, The ISME Journal, vol.273, issue.2, pp.139-146, 2009. ,
DOI : 10.1038/ismej.2008.104
Fringing reefs exposed to different levels of eutrophication and sedimentation can support similar benthic communities, Marine Pollution Bulletin, vol.92, issue.1-2, pp.212-221, 2015. ,
DOI : 10.1016/j.marpolbul.2014.12.016
Thermal adaptation in reef coral symbionts, Nature, vol.430, p.741, 2004. ,
Bleaching susceptibility and mortality of corals are determined by fine-scale differences in symbiont type, Proc. Natl Acad. Sci, pp.10444-10449, 2008. ,
DOI : 10.1073/pnas.0708049105
in Scleractinian Corals: A ???Nugget??? of Hope, a Selfish Opportunist, an Ominous Sign, or All of the Above?, Journal of Marine Biology, vol.105, issue.2, pp.1-9, 2011. ,
DOI : 10.1007/s00227-009-1263-5
The evolutionary history of Symbiodinium and scleractinian hosts???Symbiosis, diversity, and the effect of climate change, Perspectives in Plant Ecology, Evolution and Systematics, vol.8, issue.1, 2006. ,
DOI : 10.1016/j.ppees.2006.04.001
Functional diversity in coral-dinoflagellate symbiosis, Proc. Natl Acad. Sci. USA, pp.9256-9261, 2008. ,
DOI : 10.1073/pnas.0801328105
Stability of coral???endosymbiont associations during and after a thermal stress event in the southern Great Barrier Reef, Coral Reefs, vol.51, issue.3, pp.709-713, 2009. ,
DOI : 10.1007/s00338-009-0509-5
Disease dynamics of Porites bleaching with tissue loss: prevalence, virulence, transmission, and environmental drivers, Diseases of Aquatic Organisms, vol.113, issue.1, pp.59-68, 2015. ,
DOI : 10.3354/dao02828
Coral Pathogens Identified for White Syndrome (WS) Epizootics in the Indo-Pacific, PLoS ONE, vol.65, issue.6, p.2393, 2008. ,
DOI : 10.1371/journal.pone.0002393.s007
Vibrio Zinc-Metalloprotease Causes Photoinactivation of Coral Endosymbionts and Coral Tissue Lesions, PLoS ONE, vol.30, issue.3, p.4511, 2009. ,
DOI : 10.1371/journal.pone.0004511.s010
Ciliate and bacterial communities associated with White Syndrome and Brown Band Disease in reef-building corals, Environmental Microbiology, vol.40, issue.3, pp.2184-2199, 2012. ,
DOI : 10.1111/j.1462-2920.2012.02746.x
Nonspecific bacterial infection and ciliate histophagy, Molecular Ecology, vol.107, issue.5, pp.1150-1159, 2015. ,
DOI : 10.1111/1462-2920.12579
Membrane lipids of symbiotic algae are diagnostic of sensitivity to thermal bleaching in corals, Proc. Natl Acad. Sci. USA, pp.13531-13535, 2004. ,
DOI : 10.1073/pnas.0402907101
Diversity and Dynamics of a North Atlantic Coastal Vibrio Community, Applied and Environmental Microbiology, vol.70, issue.7, pp.4103-4110, 2004. ,
DOI : 10.1128/AEM.70.7.4103-4110.2004
Microbes in the coral holobiont: partners through evolution, development, and ecological interactions article type: received on: accepted on: citation : ecological interactions Civil and Environmental Engineering Department Massachusetts Institute, Front Cell. Infect. Microbiol, vol.4, pp.1-20, 2014. ,
Reef Endemism, Host Specificity and Temporal Stability in Populations of Symbiotic Dinoflagellates from Two Ecologically Dominant Caribbean Corals, PLoS ONE, vol.4, issue.7, 2009. ,
DOI : 10.1371/journal.pone.0006262.s002
on Different Reefs and Across Depths, The Biological Bulletin, vol.201, issue.3, p.348, 2001. ,
DOI : 10.2307/1543613
Patterns of coral-dinoflagellate associations in Acropora: significance of local availability and physiology of Symbiodinium strains and host-symbiont selectivity, Proceedings of the Royal Society B: Biological Sciences, vol.268, issue.1478, pp.1759-1767, 2001. ,
DOI : 10.1098/rspb.2001.1733
Geographic distribution of zooxanthella types in three coral species on the Great Barrier Reef sampled after the 2002 bleaching event, Coral Reefs, vol.23, issue.3, pp.482-487, 2005. ,
DOI : 10.1007/s00338-005-0487-1
Metagenomic analysis indicates that stressors induce production of herpeslike viruses in the coral Porites compressa, Proc. Natl. Acad. Sci. USA, pp.18413-18418, 2008. ,
Metagenomic analysis of stressed coral holobionts, Environmental Microbiology, vol.69, issue.8, pp.2148-2163, 2009. ,
DOI : 10.1111/j.1462-2920.2009.01935.x
Vibrio infections triggering mass mortality events in a warming Mediterranean Sea, Environmental Microbiology, vol.25, issue.7, pp.2007-2019, 2010. ,
DOI : 10.1111/j.1462-2920.2010.02209.x
URL : https://hal.archives-ouvertes.fr/pasteur-01136418
Physiological responses of the scleractinian coral Pocillopora damicornis to bacterial stress from Vibrio coralliilyticus, Journal of Experimental Biology, vol.214, issue.9, pp.1533-1545, 2011. ,
DOI : 10.1242/jeb.053165
The ecological distribution and comparative photobiology of symbiotic dinoflagellates from reef corals in Belize: Potential implications for coral bleaching, Limnology and Oceanography, vol.51, issue.4, pp.1887-1897, 2006. ,
DOI : 10.4319/lo.2006.51.4.1887
Dinoflagellate diversity among nudibranchs and sponges from French Polynesia: Insights into associations and transfer, Comptes Rendus Biologies, vol.338, issue.4, pp.278-283, 2015. ,
DOI : 10.1016/j.crvi.2015.01.005
URL : https://hal.archives-ouvertes.fr/hal-01145518
Metagenomic analysis of the microbial community associated with the coral Porites astreoides, Environmental Microbiology, vol.21, issue.11, pp.2707-2719, 2007. ,
DOI : 10.1111/j.1462-2920.2006.01005.x
Cell biology in model systems as the key to understanding corals, Trends in Ecology & Evolution, vol.23, issue.7, pp.369-376, 2008. ,
DOI : 10.1016/j.tree.2008.03.004
Pathology of tissue loss (white syndrome) in Acropora sp. corals from the Central Pacific, Journal of Invertebrate Pathology, vol.107, issue.2, pp.127-131, 2011. ,
DOI : 10.1016/j.jip.2011.03.009
Do corals select zooxanthellae by alternative discharge?, Marine Biology, vol.10, issue.1, pp.87-100, 2011. ,
DOI : 10.1007/s00227-010-1544-z